Intro to RNA-seq
Key Information
Content
Sample Datasets
1) Exploring your dataset
2) Using FASTQC For Data Quality Report
3) Using Trimmomatic for Trimming and Filtering
4) Using Kallisto for Pseudoalignment
Extension) Understanding Pseudoalignment
5) Importing into DESeq2
6) Using DESeq2 for Differential Expression Analysis
Extension) Understanding Alignment with STAR
Extension) Understanding BAM output with STAR
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intro (1)
intro (1)
Welcome
January 1, 2023